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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
BLCA rs12679308 chr8:29748756 C/G PPP2R2A chr8:26149007-26230196:+ 0.57 6.58 1.51E-10 Box Plot
BLCA rs12679308 chr8:29748756 C/G R3HCC1 chr8:23127633-23153792:+ 0.53 6.34 6.34E-10 Box Plot
BLCA rs12679308 chr8:29748756 C/G VPS37A chr8:17104080-17159936:+ 0.56 6.18 1.63E-9 Box Plot
BLCA rs12679308 chr8:29748756 C/G WRN chr8:30891317-31031285:+ 0.58 7.39 9.37E-13 Box Plot
BLCA rs12679308 chr8:29748756 C/G XPO7 chr8:21777182-21864096:+ 0.66 7.35 1.21E-12 Box Plot
BLCA rs12679450 chr8:9885189 A/G CHMP7 chr8:23101150-23119513:+ 0.57 6.22 1.3E-9 Box Plot
BLCA rs12679450 chr8:9885189 A/G CNOT7 chr8:17082473-17104387:- 0.6 6.32 7.16E-10 Box Plot
BLCA rs12679450 chr8:9885189 A/G ERI1 chr8:8859657-8974256:+ 0.61 6.13 2.19E-9 Box Plot
BLCA rs12679450 chr8:9885189 A/G ERICH1 chr8:564746-688106:- 0.67 6.23 1.22E-9 Box Plot
BLCA rs12679450 chr8:9885189 A/G FBXO25 chr8:356428-427967:+ 0.66 6.76 5.01E-11 Box Plot
BLCA rs12679450 chr8:9885189 A/G INTS10 chr8:19674651-19709594:+ 0.59 6.36 5.87E-10 Box Plot
BLCA rs12679450 chr8:9885189 A/G MCPH1 chr8:6264113-6506025:+ 0.68 7.02 1.01E-11 Box Plot
BLCA rs12679450 chr8:9885189 A/G R3HCC1 chr8:23127633-23153792:+ 0.54 6.23 1.21E-9 Box Plot
BLCA rs12681987 chr8:11189488 A/G FLJ10661 chr8:8086092-8102386:+ 0.37 6.55 1.89E-10 Box Plot
BLCA rs12684933 chr9:4094068 A/G C9orf123 chr9:7796493-7799799:- 0.53 6.25 1.09E-9 Box Plot